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IBB - Institute for Biotechnology and Bioengineering
CEB - Centre of Biological Engineering - University of Minho		 Universidade do Minho - Escola de Engenharia
 

 

CEB is part of the Institute for Biotechnology and Bioengineering

 
Cledir Rodrigues Santos
Preferred Name:
Cledir Santos
E-Mail Address:
cledir.santos@deb.uminho.pt @deb.uminho.pt
Activity:
Investigador Auxiliar
Project / Theme:
Microbial identification and authentication using MALDI-TOF MS
Start Date: 7/1/2009
End Date: 5/31/2013
Faculty Supervisor: Cledir Santos
Telephone: Office:604403
Laboratory: 601971
Laboratory: Laboratório de Micologia
Office: Gabinete da Micoteca
Birthday: July 26th
Website:
Access after working hours: Yes
Nationality: Brazil
Last Update: 9/19/2011

Selected Publications

1. Rodrigues, P.; Santos, C.; Kallow, W.; Erhad, M.; Welker., M.; Kozakiewicz, Z.; Lima, N.; Venâncio, A.
  MALDI-TOF MS potentialities and limits to characterise species of Aspergillus section Flavi.
  XII International Congress of Mycology (), 28-, 2008.
 
2. Souza-Motta, C.M. ; Neves, R.P.; Araújo, J.M.; Calazans, G.M.T.; Santos, C.; Carneiro-da-Cunha, M.G.; Lima-Filho, J.L.; Lima, N.
  The microbial culture collections of the Federal University of Pernambuco (UFPE) and the new consortium towards the establishment of BRC-UFPE.
  XII International Congress of Mycology (), 27-28, 2008.
 
3. Rodrigues, P.; Santos, C.; Kozakiewicz, Z.; Lima, N.; Venâncio, A.
  Aflatoxigenic polyphasic approach including maldi-tof mass spectrometry to characterise aflatoxigenic species of Aspergillus section flavi.
  28th Annual General Meeting of the European Culture Collections' Organisation (), 51-, 2009.
 
4. Pereira, L.; Santos, C.; Dias, N.M.; Lima, N.
  Aplicação do MALDI-TOF ICMS na abordagem polifásica da identificação de isolados clínicos de Trichophyton rubrum.
  25º Congresso Brasileiro de Microbiologia (), -, 2009.
 
5. Siqueira, V.M.; Santos, C.; Lima, N.
  Contaminantes e biofilmes fúngicos presentes nos sistemas de distribuição das águas de abastecimento público.
  25º Congresso Brasileiro de Microbiologia (), -, 2009.
 
6. Ottoni, C.A.; Santos, C.; Lima, N.
  Fungal decolourisation of textile dyes in liquid medium under alkaline conditions.
  Book of Abstracts of MicroBiotec09 (198), 140-, 2009.
 
7. Lima, N.; Simões, M.; Santos, C.
  Centro de recursos biológicos: novas abordagens e oportunidades para a bioeconomia.
  Jornadas 2010 do Departamento de Química (), 17-, 2010.
 
8. Santos, C.; Lima, N.
  A espectrometria de massa pela técnica de MALDI-TOF ICMS na identificação microbiana.
  Jornadas 2010 do Departamento de Química (), 18-, 2010.
 
9. Rodrigues, P.; Torres, A.; Nunes F.; Leirós, C.; Santos, C.; Venâncio, A.; Lima, N.
  Portuguese isolates of Aspergillus section Flavi unraveled by the calmodulin gene.
  2nd Conference of the European Consortium for the Barcoding of Life (), 24-, 2010.
 
10. Simões, M.; Martins, A.; Dias, N.M.; Santos, C.; Lima, N.
  Micoteca da Universidade do Minho: Implementação de um sistema de gestão da qualidade com base na ISO 9001:2008.
  Congresso Brasileiro de Recursos Genéticos (), 73-, 2010.
 
11. Oliveira, H.M.B.; Siqueira, V.M.; Barbosa, P.; Callou, M.J.A.; Lira, D.D.; Santos, C.; Lima, N.; Gusmão, N.
  Fungos em água de abastecimento.
  Congresso Brasileiro de Recursos Genéticos (), 61-, 2010.
 
12. Lima, N.; Santos, I.M.; Simões, M.; Santos, C.
  Micoteca da Universidade do Minho (MUM): A culture collection preparing the future.
  11th International Symposium on the Genetics of Industrial Microorganisms (), -, 2010.
 
13. Lima, N.; Ottoni, C.A.; Lima, L.; Santos, C.
  Fungal mechanisms of textile dyes biodegradation.
  11th International Symposium on the Genetics of Industrial Microorganisms (), -, 2010.
 
14. Santos, C.; Lima, N.; Sampaio, P.; Pais, C.
  Use of MALDI-TOF ICMS to identify Candida Species with clinical relevance.
  29th Annual General Meeting of the European Culture Collections' Organisation (), -, 2010.
 
15. Rodrigues, P.; Fraga, M.E.; Santos, C.; Venâncio, A.; Lima, N.
  Calmodulin gene as good voucher as MALDI-TOF ICMS to identify Portuguese isolates of Aspergillus section Flavi.
  International Symposium on Microbial Resources Management, Utilization and Fungal DNA Barcode (), 43-, 2010.
 
16. Santos, C.; Lima, N.
  MALDI-TOF ICMS as a powerful technique for strain authentications in Culture Collections.
  12th International Conference on Culture Collections (ICCC12) (), 18-, 2010.
 
17. Simões, M.; Martins, A.; Dias, N.M.; Santos, C.; Lima, N.
  Micoteca da Universidade do Minho (MUM): Implementationof a Quality Management System Based on ISO 9001:2008.
  12th International Conference on Culture Collections (ICCC12) (), 50-51, 2010.
 
18. Santos, C.; Lima, N.
  Microbial classification/identification and authentication using MALDI-TOF intact cell mass spectrometry.
  12th International Conference on Culture Collections (ICCC12) (), 67-, 2010.
 
19. Santos, C.; Lima, N.; Sampaio, P.; Pais, C.
  Use of MALDI-TOF ICMS on yeast identification: Application on Candida species with clinical relevance.
  12th International Conference on Culture Collections (ICCC12) (), -, 2010.
 
20. Santos, C.; Lima, N.
  MALDI-TOF ICMS: Quando começar a usar?.
  II Simpósio Internacional de Microbiologia Clínica (), -, 2010.
 
21. Oliveira, H.M.B.; Siqueira, V.M.; Santos, C.; Lima, N.; Gusmão, N.B.
  Fungi in a water supply system in Recife Metropolitan Region (Brazil).
  Water Contamination Emergencies IV – Monitoring, Understanding and Acting (), -, 2010.
 
22. Simões, M.; Santos, I.M.; Santos, C.; Lima, N.
  Micoteca da Universidade do Minho (MUM) a Portuguese Culture Collection.
  2nd Meeting of the Institute for Biotechnology and Bioengineering (), 187-, 2010.
 
23. Santos, C.; Coutinho, C.; Sá-Correia, I.; Lima, N.
  Intact cell MALDI-TOF (ICMS) mass spectrometry for rapid identification and subtyping of Burkholderiacepacia complex bacteria.
  2nd Meeting of the Institute for Biotechnology and Bioengineering (), 28-, 2010.
 
24. Ottoni, C.A.; Santos, C.; Lima, N.
  Textile dyes fungal mechanisms of biodegradation.
  2nd International Workshop Advances in Science and Technology of Natural Resources (), -, 2010.
 
25. Simões, M.; Martins, A.; Dias, N.M.; Santos, C.; Lima, N.
  Micoteca da Universidade do Minho (MUM): Implementation of a quality management system based on ISO 9001:2008..
  30th Annual General Meeting of the European Culture Collections' Organisation (), -, 2011.
 
26. Simões, M.; Santos, C.; Lima, N.; Navarro, D.; Lesage-Meessen, L.
  High throughput screening of fungal enzymes of industrial interest.
  30th Annual General Meeting of the European Culture Collections' Organisation (), -, 2011.
 
27. Santos, C.; Lima, N.
  MALDI-TOF MS: Potentialities and applications on the microbial field.
  30th Annual General Meeting of the European Culture Collections' Organisation (), -, 2011.
 
28. Pereira, L.; Dias, N.M.; Santos, C.; Lima, N.
  MALDI-TOF ICMS identification and molecular typing of Trichophyton rubrum dermatophyte strains.
  30th Annual General Meeting of the European Culture Collections' Organisation (), -, 2011.
 
29. Passarini, M.R.Z.; Santos, C.; Lima, N.; Sette, L.D.
  Characterisation of filamentous fungal diversity of Trichoderma genus isolated from marine sponge by sequencing ITS-rDNA and MALDI-TOF ICMS.
  30th Annual General Meeting of the European Culture Collections' Organisation (), -, 2011.
 
30. Klein, N.M.; Santos, C.; Lima, N.; Asensi, M.D.
  Establishment of a bacterial reference strains culture collection – university hospital Cassiano Antônio de Moraes (CCBR-HUCAM), Vitória (ES), Brazil.
  30th Annual General Meeting of the European Culture Collections' Organisation (), -, 2011.
 
31. Marília Maciel; Santos, C.; Lima, N.; Souza-Motta, C.
  Polyphasic identification of cultures of Aspergillus section Nigri preserved under mineral oil at URM Culture Collection.
  30th Annual General Meeting of the European Culture Collections' Organisation (), -, 2011.
 
32. Pereira, L.; Dias, N.M.; Santos, C.; Lima, N.
  Is MALDI-TOF ICMS able to discriminate dermatophyte clones?.
  FEMS 4th Congress of European Microbiologists (), -, 2011.
 
33. Santos, C.; Lima, N.
  Identification/characterisation and authentication of microbial strains by MALDI-TOF ICMS.
  FEMS 4th Congress of European Microbiologists (), -, 2011.
 
34. Ottoni, C.A.; Lima, L.; Santos, C.; Lima, N.
  Bioreactor for the decolourisation of textile dye using ligninolytic fungi under high alkaline and salt conditions.
  FEMS 4th Congress of European Microbiologists (), -, 2011.
 
35. Passarini, M.R.Z.; Santos, C.; Lima, N.; Sette, L.D.
  Identification of Penicillia species isolated from southern Atlantic Ocean marine sponge using a polyphasic approach including MALDI-TOF ICMS.
  FEMS 4th Congress of European Microbiologists (), -, 2011.
 
36. Elgueta, S.; Santos, C.; Lima, N.; Diez, M.C.
  Ligninolytic enzymes activities and SEM analysis of fungal inoculum of anthracophyllum discolour.
  FEMS 4th Congress of European Microbiologists (), -, 2011.
 
37. Santos, C.; Souza-Motta, C.M.; Neves, R.P.; Araújo, J.M.; Calazans, G.M.T.; Carneiro-da-Cunha, M.G.; Lima-Filho, J.L.; Erhard, M.; Kallow, W.; Paterson, R.R.M.; Venâncio, A.; Lima, N.
  MALDI-TOF Mass Spectrometry for Identification of the Aspergillus niger Aggregate.
  1st International Workshop on Biotechnology (), 327-328, 2008.
 
38. Lima, N.; Rodrigues, P.; Soares, C.; Santos, C.; Paterson, R.R.M.; Venâncio, A.
  Modern Polyphasic Methods that Include MALDI-TOF Analyses for Fungal Identifications and Authentications.
  27th Annual General Meeting of the European Culture Collections' Organisation (), 11-, 2008.
 
39. Santos, C.; Okada, K.; Silva, C.; Gusmão, N.; Nascimento, A.; Messias, A.; Lima, N.; Takaki, G.
  Environmental and industrial application criteria to establish the microbial culture collection of the Catholic University of Pernambuco (UCP).
  27th Annual General Meeting of the European Culture Collections' Organisation (), 61-, 2008.
 
40. Santos, C.; Paterson, R.R.M.; Venâncio, A.; Lima, N.
  Integration of MALDI-TOF MS Data in the Quality Control of Microbial Culture Collections.
  27th Annual General Meeting of the European Culture Collections' Organisation (), 65-, 2008.
 
41. Rodrigues, P.; Santos, C.; Kozakiewicz, Z.; Venâncio, A.; Lima, N.
  MALDI-TOF ICMS as a modern approach to identify potential aflatoxigenic fungi.
  II International Symposium on Fungal and Algal Toxins in Industry (), 110-111, 2010.
 
42. Rodrigues, P.; Santos, C.; Venâncio, A.; Lima, N.
  Characterization and identification of Aspergillus section flavi isolates from portuguese almonds using a polyphasic approach including MALDI-TOF ICMS .
  Semana da Escola de Engenharia (), -, 2010.
 
43. Lima, N.; Ottoni, C.A.; Santos, C.
  Fungos e biorremediação .
  VI Congresso Brasileiro de Micologia (), 742-751, 2010.
 
44. Santos, C.
  The fast identification of antagonist microorganisms by MALDI-TOF ICMS technique for an effective biological control of pathogens.
  Tropical Plant Pathology 36(), -, 2011.
 
45. Santos, C.; Capela, R.; Pereira, C.; Pannecouque, C.; De Clercq, E.; Moreira, R.; Gomes, P.
  Structure-activity relationships for dipeptide prodrugs of acyclovir: implications for prodrug design.
  European Journal of Medicinal Chemistry 44(6), 2339-2346, 2009.
 
46. Dias, N.M.; Oliveira, M.M.E.; Portela, M.; Santos, C.; Zancope-Oliveira, R.M.; Lima, N.
  Sporotrichosis Caused by Sporothrix mexicana, Portugal.
  Emerging Infectious Diseases 17(10), 1975-1976, 2011.
 
47. Rodrigues, P.; Santos, C.; Venâncio, A.; Lima, N.
  Species identification of Aspergillus section Flavi isolates from Portuguese almonds using phenotypic, including MALDI-TOF ICMS, and molecular approaches.
  Journal of Applied Microbiology 111(4), 877-892, 2011.
 
48. Santos, C.; Lima, N.; Sampaio, P.; Pais, C.
  Matrix-assisted laser desorption/ionization time-of-flight intact cell mass spectrometry to detect emerging pathogenic Candida species.
  Diagnostic Microbiology and Infectious Disease 71(3), 304-308, 2011.
 
49. Dias, N.M.; Portela, M.A.; Santos, C.; Lima, N.
  Toenail onychomycosis in a Portuguese geriatric population.
  Mycopathologia 172(1), 55-61, 2011.
 
50. Siqueira, V.M.; Oliveira, H.M.B.; Santos, C.; Paterson, R.R.M.; Gusmão, N.B.; Lima, N.
  Filamentous fungi in drinking water, particularly in relation to biofilm formation.
  International Journal of Environmental Research and Public Health 8(2), 456-469, 2011.
 
51. Santos, C.; Simões, M.; Martins, A.; Dias, N.M.; Lima, N.
  Micoteca da Universidade do Minho (MUM): Appraisal of the implemented Quality Management System based on ISO 9001:2008.
  Anais do 6º Congresso Brasileiro de Micologia (R509), 427-428, 2010.
 
52. Santos, C.; Lima, N.
  A identificação de fungos pela espectrometria de massa através da técnica de MALDI-TOF ICMS.
  Anais do 6º Congresso Brasileiro de Micologia (P012), 566-574, 2010.
 
53. Fernandes, S.; Lima, N.; Santos, C.
  Fungal Nanotechnology.
  Anais do 6º Congresso Brasileiro de Micologia (P013), 574-578, 2010.
 
54. Simões, M.; Santos, I.M.; Santos, C.; Lima, N.
  Micoteca da Universidade do Minho (MUM): Uma colecção de fungos filamentosos a olhar o futuro.
  25º Congresso Brasileiro de Microbiologia (1300-3), -, 2009.
 
55. Rodrigues, P.; Soares, C.; Freitas-Silva, O.; Paterson, R.R.M.; Santos, C.; Kozakiewicz, Z.; Venâncio, A.; Lima, N.
  Micotoxinas: Contributos da Micoteca da Universidade do Minho (MUM) para a Segurança Alimentar.
  25º Congresso Brasileiro de Microbiologia (1246-2), -, 2009.
 
56. Rodrigues, P.; Santos, C.; Venâncio, A.; Lima, N.
  Integrated morphologic, metabolic, molecular and spectral methods for the identification of Aspergillus Section Flavi isolated from Portuguese almonds.
  9th International Mycological Congress – IMC9: The Biology of Fungi (P3.148), -, 2010.
 
57. Ottoni, C.A.; Santos, C.; Lima, N.
  Effect of alkaline conditions on decolourisation of reactive black 5 by white rot fungi.
  9th International Mycological Congress – IMC9: The Biology of Fungi (P2.40), -, 2010.
 
58. Rodrigues, P.; Soares, C.; Freitas-Silva, O.; Santos, C.; Paterson, R.R.M.; Kozakiewicz, Z.; Venâncio, A.; Lima, N.
  Contributions of Micoteca da Universidade do Minho To Food Mycology.
  9th International Mycological Congress – IMC9: The Biology of Fungi (P4.231), -, 2010.
 
59. Pereira, L.; Dias, N.M.; Santos, C.; Lima, N.
  MALDI-TOF ICMS: capability, potentiality and limits in the fast identification of Trichophyton rubrum from clinical cases occurrence in Portuguese health centres.
  20th European Congress of Clinical Microbiology and Infectious Diseases Clinical Microbiology and Infection16(S2), S530-P1795, 2010.
 
60. Santos, C.; Fraga, M.E.; Kozakiewicz, Z.; Lima, N.
  Fourier transform infrared as a powerful technique for the identification and characterization of filamentous fungi and yeasts.
  Research in Microbiology 161(2), 168-175, 2010.
 
61. Pereira, L.; Dias, N.M.; Santos, C.; Lima, N.
  Identification of clinical isolates Trichophyton rubrum using a rapid and accurate mass spectral analysis (MALDI‐TOF ICMS).
  Book of Abstracts of MicroBiotec09 (), 95-, 2009.
 
62. Santos, C.; Paterson, R.R.M.; Venâncio, A.; Lima, N.
  Filamentous fungal characterizations by matrix-assisted laser desorption⁄ionization time-of-flight mass spectrometry.
  Journal of Applied Microbiology 108(2), 375-385, 2010.
 
63. Santos, C.; Paterson, R.R.M.; Venâncio, A.; Lima, N.
  A case study on Aspergillus section Nigri: identification and characterisation of fungal strains from nature.
  Workshop on Analysis Patterns of Exchange and use in the Global Microbial Commons (), -, 2009.
 
64. Santos, C.; Lima, N.
  Polyphasic approach that include MALDI-TOF analyses for filamentous fungi identifications.
  Colóquio da Micoteca ao Centro de Recursos Biológicos: Desafios para a MEAN (), -, 2009.
 
65. Rodrigues, P.; Santos, C.; Kozakiewicz, Z.; Venâncio, A.; Lima, N.
  Polyphasic approach including MALDI-TOF mass spectrometry to characterise aflatoxigenic species of Aspergillus section flavi.
  XXVIII Annual Meeting of the European Culture Collections' Organization (), -, 2009.
 
66. Santos, C.; Lima, N.
  Biological resource centres (BRCs): european and global projects.
  Colóquio da Micoteca ao Centro de Recursos Biológicos: Desafios para a MEAN (), -, 2009.
 
67. Santos, C.; Lima, N.
  Mass spectral analysis in the characterisation of fungi using MALDI-TOF mass spectrometry.
  12th Conference in Genomics and Proteomics of Human Pathogens: Target Molecules and biomarkers in the characterization of microbes in disease and the environment (), -, 2009.
 
68. Rodrigues, P.; Soares, C.; Santos, C.; Fraga, M.E.; Venâncio, A.; Lima, N.
  A polyphasic approach for black Aspergillus identification using MALDI-TOF MS.
  FEMS 2009 - 3rd Congress of European Microbiologists (Microbes and man: interdependence and future challenges) (), -, 2009.
 
69. Ottoni, C.A.; Santos, C.; Lima, N.
  Plate screening of decolourisation of textile dyes by fungi using alkaline conditions.
  FEMS 2009 - 3rd Congress of European Microbiologists (Microbes and man: interdependence and future challenges) (), -, 2009.
 
70. Paterson, R.R.M.; Sariah, M.; Lima, N.; Zainal Abidin, M.A.; Santos, C.
  Mutagenic and inhibitory compounds produced by fungi affect detrimentally diagnosis and phylogenetic analyses.
  Current Bioactive Compounds 4(4), 245-257, 2008.
 
71. Paterson, R.R.M.; Santos, C.; Lima, N.
  A threat to biodiesel production from Palm oil by disease caused by the fungus Ganoderma.
  Anais do CONBIEN 2008 - Brazilian Congress of Bioenergy and International Symposium of Biofuels (), 1-4, 2008.