Oscar Dias

Invited Assistant Researcher


Career

  • 2016 - 2019: Invited Assistant Researcher, Universidade do Minho
  • 2016 - 2017: Invited Assistant Professor, Universidade do Minho

Qualifications

  • 2013: PhD Program in Chemical and Biological Engineering, Universidade do Minho

Roles and Responsibilities

  • 2009 - 2012: Member of the Academic Senate, Universidade do Minho

Laboratory Management


  • 2016 - 2019: MetaLife: modeling metagenomes for life sciences and bioengineering
  • 2013 - 2016: Metabolic engineering applied to microbial cell factories (Systems biology; Bioinformatics)
  • 2013 - 2013: PEM - Technological Platform to support Metabolic Engineering
  • 2009 - 2013: Reconstruction of the Genome-scale Metabolic Network of Kluyveromyces lactis
  • 2007 - 2008: Development and application of informatics tools for genome-scale micro-organisms modelling

Projects


Research Students


Selected Publications

1
Reconstructing high-quality large-scale metabolic models with merlin
  • In Marco Fondi. Metabolic Network Reconstruction and Modeling: Methods and Protocols, Vol. 1716, Springer, 2018. ISBN: 978-1-4939-7528-0
2
Quantitative physiology and elemental composition of Kluyveromyces lactis CBS 2359 during growth on glucose at different specific growth rates
  • Antonie van Leeuwenhoek - Journal of Microbiology, (In Press), 2017
3
Genome-wide semi-automated annotation of transporter systems
  • IEEE-ACM Transactions on Computational Biology and Bioinformatics, 14(2), 443-456, 2017
4
Systems Biology in Fungi
  • In R. Russell M. Paterson, Nelson Lima. Molecular Biology of Food and Water Borne Mycotoxigenic and Mycotic Fungi, Boca Raton: CRC Press, 2015. ISBN: 9781466559868, 69-92
5
Reconstructing genome-scale metabolic models with merlin
  • Nucleic Acids Research, 43(8), 3899-3910, 2015
6
iOD907, the first genome-scale metabolic model for the milk yeast Kluyveromyces lactis
  • Biotechnology Journal, 9(6), 776-790, 2014
7
Genome-wide metabolic (re-) annotation of Kluyveromyces lactis
  • BMC Genomics, 13(517), 1-20, 2012
Full List