1

Alexandra Paulina Quintela Antas Freitas Leite [Supervisors: Belo, Isabel; Salgado, José Manuel]

Search new alternatives for portuguese agro-industrial wastes by semi-solid and solid-state fermentation to obtain antioxidant compounds

PhD Program in Chemical and Biological Engineering, Universidade do Minho, since September 01, 2017

2

Ana Cláudia dos Santos Pereira [Supervisors: Rodrigues, Lígia R.; Sales, M. Goreti F.]

Development of a colorimetric multiplex biosensor for detection of cancer biomarkers

PhD Program in Bioengineering, Universidade do Minho, since October 01, 2016

3

Ana Isabel Geraldes Rodrigues [Supervisors: Rodrigues, Lígia R.; Teixeira, José A.]

Design of Pseudomonas aeruginosa strains towards the production of effective biocontrol agents

PhD Program in Chemical and Biological Engineering, Universidade do Minho, since October 01, 2015

4

Ana Sofia da Silva Pereira [Supervisors: Belo, Isabel; Lopes, Marlene]

Yarrowia lipolytica as a biorefinery platform based on low-cost feedstocks

PhD Program in Chemical and Biological Engineering, Universidade do Minho, since February 01, 2018

5

Anis Hamdi [Supervisors: Rocha, Isabel]

Bioengineering of complex biopharmaceuticals

PhD Program in Bioengineering, Universidade do Minho, since June 12, 2017

6

Antonio Renê Benevides de Melo [Supervisors: Mesquita, Daniela P.; Ferreira, Eugénio C.]

The role of extracellular polymeric substances during the biodegradation of contaminants

PhD Program in Chemical and Biological Engineering, Universidade do Minho, since February 20, 2017

7

Beatriz Alexandra Batista Cardoso [Supervisors: Rodrigues, Lígia R.; Silvério, Sara C.]

Lactulose production in a single-step process using whole cells of Saccharomyces cerevisiae producing cellobiose 2-epimerase

PhD Program in Chemical and Biological Engineering, Universidade do Minho, since January 01, 2018

8

Carlos Alberto da Silva Rodrigues [Supervisors: Ferreira, Eugénio C.]

Energy Efficiency of Aeration Systems in Biological Processes of Effluent Treatment - Application of Mathematical Modeling

PhD Program in Chemical and Biological Engineering, Universidade do Minho, since January 01, 2017

9

Cátia Sofia dos Santos Pereira [Supervisors: Manuela Côrte-real (Cbma); Rodrigues, Lígia R.]

Study of the molecular mechanism underlying the anticancer activity of lactoferrin

PhD Program in Molecular and Environmental Biology, Universidade do Minho, since October 01, 2016

10

Cristiano da Silva Leal [Supervisors: Mesquita, Daniela P.; Amaral, A. Luís]

Operation and monitoring of a sequencing batch reactor with aerobic granular biomass for pharmaceutically active compounds removal using quantitative image analysis and chemometric techniques

PhD Program in Chemical and Biological Engineering, Universidade do Minho, since October 01, 2016

11

Daniel Filipe Martins Afonso Correia de Sousa [Supervisors: Belo, Isabel]

Agro-industrial wastes up-grading by solid-state fermentation: application to animal feed and as bioactive compounds source.

External PhD Program, Universidade do Minho, since March 01, 2018

12

Débora Carina Gonçalves de Abreu Ferreira [Supervisors: Rodrigues, Lígia R.]

Peptide-mediated targeted delivery system towards triple negative breast cancer treatment

PhD Program in Bioengineering, Universidade do Minho, since October 01, 2016

13

Delora Soeiro Baptista [Supervisors: Rocha, Miguel; Pedro Ferreira]

Machine learning for the prediction of drug sensitivity/synergy in cancer treatment

PhD Program in Biomedical Engineering, Universidade do Minho, since October 01, 2017

14

Diana Andrade e Sousa [Supervisors: Rodrigues, Lígia R.; Fátima Baltazar (Icvs)]

Targeting oncogenic miRNAs in Triple Negative Breast Cancer using CRISPR/cas9-based approach

PhD Program in Bioengineering, Universidade do Minho, since January 01, 2018

15

Fernando João Pereira da Cruz [Supervisors: Dias, Oscar; Rocha, Miguel]

Blueprint: Documenting the Complexity of Metabolic Regulation by Reconstruction of Integrated Metabolic-Regulatory Models

PhD Program in Biomedical Engineering, Universidade do Minho, since October 01, 2018

16

Joana Filipa Azevedo Oliveira [Supervisors: Rocha, Isabel]

Bioengeneering - Optimization of butanol production

PhD Program in Bioengineering, Universidade do Minho, since June 01, 2017

17

Jorge Miguel Lourenço Ferreira [Supervisors: Rocha, Miguel; Fátima Baltazar]

Metabolic modeling based algorithms for drug discovery in cancer

PhD Program in Biomedical Engineering, Universidade do Minho, since September 01, 2017

18

José Roberto Fuzer Neto [Supervisors: Rocha, Isabel; Simão Soares]

PhD Project

PhD Program in Chemical and Biological Engineering, Universidade do Minho, since September 04, 2017

19

José Vítor de Castro Vieira [Supervisors: Rocha, Miguel; Julio Saez-Rodriguez]

Integrative pathway analysis approaches for cancer research and drug development

PhD Program in Biomedical Engineering, Universidade do Minho, since March 01, 2017

20

Luis Osvaldo Diaz Kim [Supervisors: Rocha, Miguel]

Bi-Level Strain Optimization Using Hybrid Models

PhD Program in Computer Science, Universidade do Minho, since February 24, 2016

21

Márcia Regina Linhares Couto [Supervisors: Rodrigues, Lígia R.; Rodrigues, Joana L.]

Engineering a biosynthetic pathway for high-value glycosaminoglycans production in Saccharomyces cerevisiae

PhD Program in Bioengineering, Universidade do Minho, since January 01, 2018

22

Maria Georgina Sande [Supervisors: Rodrigues, Lígia R.]

Multifunctional Materials to Capture Pathogens from Biological Samples

PhD Program in Chemical and Biological Engineering, Universidade do Minho, since August 27, 2018

23

Mariana Conde Carvalho Gonçalves Carneiro [Supervisors: Sales, M. Goreti F.; Rodrigues, Lígia R.]

Test-strips for monitoring cancer biomarkers in point-of-care

PhD Program in Chemical and Biological Engineering, Universidade do Minho, since November 01, 2017

24

Patrícia Sofia Sousa Dias [Supervisors: Rocha, Isabel; Domingues, Lucília]

Optimization of organic acids production in Saccharomyces cerevisiae chassis cells

PhD Program in Chemical and Biological Engineering, Universidade do Minho, since October 01, 2016

25

Paul Drescher [Supervisors: Rocha, Isabel; Simão Soares]

PhD project

PhD Program in Chemical and Biological Engineering, Universidade do Minho, since September 04, 2017

26

Paulo Ricardo Carvalho Vilaça [Supervisors: Rocha, Miguel]

Computer Aided Design of Metabolic Pathways

PhD Program in Computer Science MAP-i, Universidade do Minho, since September 13, 2010

27

Rebeca Tatiana de Souto Santos [Supervisors: Rocha, Miguel]

Metabolomics-based approaches for Food authentication and Traceability

PhD Program in Chemical and Biological Engineering, Universidade do Minho, since October 01, 2016

28

Rúben André Costa Rodrigues [Supervisors: Rocha, Miguel]

Development of an integrated knowledge base for gastric cancer

PhD Program in Biomedical Engineering, Universidade do Minho, since September 01, 2017

29

Sara Manso de Sousa Cardoso [Supervisors: Rocha, Miguel]

Systems-level modelling of the cancer and immune metabolome to improve immunotherapeutic outcomes

PhD Program in Biomedical Engineering, Universidade do Minho, since October 01, 2018

30

Sérgio Alves da Silva [Supervisors: Mesquita, Daniela P.; Alves, M. Madalena]

Novel insights to develop and characterize aerobic granular sludge for wastewater treatment

PhD Program in Chemical and Biological Engineering, Universidade do Minho, since April 01, 2017

31

Sílvia Mariana Vilaça Fernandes [Supervisors: Belo, Isabel; Lopes, Marlene]

Strategies of improving gluconic acid production using pressurized bioreactors

PhD Program in Chemical and Biological Engineering, Universidade do Minho, since October 01, 2017

32

Sophia Torres Santos [Supervisors: Rocha, Isabel; Dias, Oscar]

Design and optimization of microbial communities

PhD Program in Bioengineering, Universidade do Minho, since April 01, 2017

33

Sushil Kumar Shakyawar [Supervisors: Rocha, Isabel]

Metabolic systems biology of Leishmania major

PhD Program in Chemical and Biological Engineering, Universidade do Minho, since February 15, 2015

34

Tugçe Çaykara [Supervisors: Rodrigues, Lígia R.]

Development of Innovative Anti-Adhesive Materials in Diagnosis Tools

PhD Program in Chemical and Biological Engineering, Universidade do Minho, since August 29, 2018